Function reference • GWASBrewer

All functions

GWASBrewer: GWASBrewer

compute_h2(): Compute hertiability from standardized or non-standardized effects

gen_bhat_from_b(): Generate beta hats from standardized or non-standardized direct SNP effects and LD

generate_random_F(): Generate random F

resample_inddata(): Sample individual level data with joint effects matching a sim_mv object

resample_sumstats(): Resample Summary Statistics for Existing Simulation Object

rescale_sumstats(): Re-Scale Effects of a Simulation Object

rnormalmix(): Simulate from a normal mixture distribution

sim_extract_ld(): Extract LD matrix from simulated data

sim_ld_proxy(): Retrieve LD proxies

sim_ld_prune(): LD prune simulated data

sim_lf(): Simulate summary statistics

sim_mv(): Simulate multivariate GWAS data

sim_mv_determined(): Simulate multivariate GWAS Data with Specified Direct Effects

xyz_to_G(): Generate G from XYZ Specification